There are two options for getting citations from PubMed into Endnote:
1. Click on "Capture Reference" (If you have installed this plugin). A popup window will open with a list of your folders. Choose the folder and click on "save to". (This will automatically capture all the citations on the screen).
2. To select individual citations, click on the references you want to export, then click on “Send To”
From the drop-down box, select “Citation Manager". Click on “Create File".
The new citations will appear in the “Imported” and “All References” sections of your Endnote library.